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Coloured fuzzy Petri nets for modelling and analysing membrane systems

  • Membrane systems are a very powerful computational modelling formalism inspired by the internal organisation of living cells. Modelling of membrane systems is challenged by composing many structurally similar components, which may result in very large models. Furthermore, some components may suffer from a lack of precise kinetic parameters. Coloured fuzzy Petri nets combine coloured Petri nets with fuzzy kinetic parameters, and thus offer an approach to address these challenges. In this paper, we use coloured fuzzy Petri nets to model and simulate membrane systems which are enriched by fuzzy kinetic parameters. We also introduce a methodology and workflow utilising coloured fuzzy Petri nets for modelling and simulating general biological systems which have to cope with incomplete knowledge of their kinetic data.

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Author: George Assaf, Monika HeinerORCiD, Fei LiuORCiD
URL:https://www.sciencedirect.com/science/article/pii/S0303264721002318?via%3Dihub
DOI:https://doi.org/10.1016/j.biosystems.2021.104592
ISSN:0303-2647
Title of the source (English):Biosystems
Document Type:Scientific journal article peer-reviewed
Language:English
Year of publication:2022
Tag:Coloured fuzzy continuous Petri net; Coloured fuzzy hybrid Petri net; Coloured fuzzy stochastic Petri nets; Fuzzy membrane systems; Fuzzy simulation; Modelling; Parameter uncertainties
Volume/Year:212
First Page:1
Last Page:10
Article number:104592
Faculty/Chair:Fakultät 1 MINT - Mathematik, Informatik, Physik, Elektro- und Informationstechnik / FG Datenstrukturen und Softwarezuverlässigkeit
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