@misc{FriedrichHollensteinerSchneideretal., author = {Friedrich, Ines and Hollensteiner, Jacqueline and Schneider, Dominik and Poehlein, Anja and Hertel, Robert and Daniel, Rolf}, title = {First Complete Genome Sequences of Janthinobacterium lividum EIF1 and EIF2 and their Comparative Genome Analysis}, series = {Genome Biology and Evolution}, volume = {12}, journal = {Genome Biology and Evolution}, number = {10}, issn = {1759-6653}, doi = {10.1093/gbe/evaa148}, pages = {1782 -- 1788}, abstract = {We present the first two complete genomes of the Janthinobacterium lividum species, namely strains EIF1 and EIF2, which both possess the ability to synthesize violacein. The violet pigment violacein is a secondary metabolite with antibacterial, antifungal, antiviral, and antitumoral properties. Both strains were isolated from environmental oligotrophic water ponds in G{\"o}ttingen. The strains were phylogenetically classified by ANI analysis and showed a species assignment to Janthinobacterium lividum with 97.72\% (EIF1) and 97.66\% (EIF2) identity. These are the first complete genome sequences of strains belonging to the species Janthinobacterium lividum. The genome of strain EIF1 consists of one circular chromosome (6,373,589 bp) with a GC-content of 61.98\%. The genome contains 5,551 coding sequences, 122 rRNAs, 93 tRNAs, and 1 tm-RNA. The genome of EIF2 comprises one circular chromosome (6,399,352 bp) with a GC-content of 61.63\% and a circular plasmid p356839 (356,839 bp) with a GC-content of 57.21\%. The chromosome encodes 5,691 coding sequences, 122 rRNAs, 93 tRNAs, and 1 tm-RNA and the plasmid harbors 245 coding sequences. In addition to the highly conserved chromosomally encoded violacein operon, the plasmid comprises a non-ribosomal peptide synthetase cluster (NRPS) with similarity to xenoamicin, which is a bioactive compound effective against protozoan parasites.}, language = {en} } @misc{HollensteinerFriedrichHollsteinetal., author = {Hollensteiner, Jacqueline and Friedrich, Ines and Hollstein, Lucas and Lamping, Jan-Philipp and Wolf, Kalina and Liesegang, Heiko and Poehlein, Anja and Hertel, Robert and Daniel, Rolf}, title = {Complete Genome Sequence of Kinneretia sp. Strain DAIF2, Isolated from a Freshwater Pond}, series = {Microbiology Resource Announcements}, volume = {10}, journal = {Microbiology Resource Announcements}, number = {8}, issn = {2576-098X}, doi = {10.1128/MRA.00003-21}, pages = {1 -- 3}, abstract = {Kinneretia sp. strain DAIF2 was isolated from a eutrophic freshwater pond. The genome consists of a single chromosome (6,010,585 bp) with a GC content of 69.3\%. The whole-genome-based phylogeny of DAIF2 revealed a closest relation to the genus Kinneretia.}, language = {en} } @misc{FriedrichHollensteinerScherfetal., author = {Friedrich, Ines and Hollensteiner, Jacqueline and Scherf, Janna and Weyergraf, Judith and Klassen, Anna and Poehlein, Anja and Hertel, Robert and Daniel, Rolf}, title = {Complete Genome Sequence of Stenotrophomonas indicatrix DAIF1}, series = {Microbiology Resource Announcements}, volume = {10}, journal = {Microbiology Resource Announcements}, number = {6}, issn = {2576-098X}, doi = {10.1128/MRA.01484-20}, pages = {1 -- 3}, abstract = {We present the complete genome of Stenotrophomonas indicatrix DAIF1, which was isolated from an oligotrophic pond in a water protection area. Whole-genome alignments indicated that strain DAIF1 belongs to the species Stenotrophomonas indicatrix. The whole genome (4,639,375 bp) harbors 4,108 protein-encoding genes, including 3,029 genes with assigned functions.}, language = {en} }