@misc{ParvuGilbertHeineretal., author = {P{\^a}rvu, Ovidiu and Gilbert, David and Heiner, Monika and Liu, Fei and Saunders, Nigel and Shaw, Simon}, title = {Spatial-temporal modelling and analysis of bacterial colonies with phase variable genes}, series = {ACM Transactions on Modeling and Computer Simulation (TOMACS)}, volume = {25}, journal = {ACM Transactions on Modeling and Computer Simulation (TOMACS)}, number = {2}, issn = {1558-1195}, doi = {10.1145/2742546}, pages = {13}, language = {en} } @inproceedings{ParvuGilbertHeineretal., author = {Parvu, Ovidiu and Gilbert, David and Heiner, Monika and Liu, Fei and Saunders, Nigel}, title = {Modelling and Analysis of Phase Variation in Bacterial Colony Growth}, series = {Computational Methods in Systems Biology, 11th International Conference, CMSB 2013, Klosterneuburg, Austria, September 22-24, 2013}, booktitle = {Computational Methods in Systems Biology, 11th International Conference, CMSB 2013, Klosterneuburg, Austria, September 22-24, 2013}, editor = {Gupta, Ashutosh and Henzinger, Thomas A.}, publisher = {Springer}, address = {Berlin [u.a.]}, isbn = {978-3-642-40707-9}, doi = {10.1007/978-3-642-40708-6_7}, pages = {78 -- 91}, language = {en} } @inproceedings{GilbertHeinerLiuetal., author = {Gilbert, David and Heiner, Monika and Liu, Fei and Saunders, Nigel}, title = {Colouring Space - A Coloured Framework for Spatial Modelling in Systems Biology}, series = {Application and Theory of Petri Nets and Concurrency, 34th International Conference, PETRI NETS 2013, Milan, Italy, June 24-28, 2013}, booktitle = {Application and Theory of Petri Nets and Concurrency, 34th International Conference, PETRI NETS 2013, Milan, Italy, June 24-28, 2013}, publisher = {Springer}, address = {Berlin [u.a.]}, pages = {230 -- 249}, language = {en} } @misc{XuCurtisPowersetal., author = {Xu, Hongwei and Curtis, Tanya Y. and Powers, Stephen J. and Raffan, Sarah and Gao, Runhong and Huang, Jianhua and Heiner, Monika and Gilbert, David and Halford, Nigel G.}, title = {Genomic, biochemical and modelling analyses of asparagine synthetases from wheat}, series = {Frontiers in Plant Science}, volume = {8}, journal = {Frontiers in Plant Science}, issn = {1664-462X}, doi = {10.3389/fpls.2017.02237}, pages = {12}, language = {en} } @misc{WagnerDrogoulFishwicketal., author = {Wagner, Gerd and Drogoul, Alexis and Fishwick, Paul and Gilbert, Nigel and Pegden, Dennis and Yilmaz, Levent}, title = {Panel Discussion: On the Unity and Diversity of Computer Simulation}, series = {Journal of Simulation Engineering}, volume = {1}, journal = {Journal of Simulation Engineering}, issn = {2569-9466}, pages = {9}, abstract = {The term Computer Simulation subsumes different simulation paradigms, languages and implementation technologies as well as many different application areas each with its own scientific communities. So, there is clearly a lot of conceptual, methodological, technological and application diversity in the area of Computer Simulation. From its start in 1967, the Winter Simulation Conference managed to get four scientific communities involved: computer scientists, electrical engineers, industrial engineers and mathematicians (operations researchers). Only later, in 2011 and 2012, an attempt was made to get environmental and social scientists involved who have been adopting the idea of "individual-based" or "agent-based" simulation. Today, two American, a European and an Asian social simulation conference have been established. How much unity exists between the scientific areas and communities represented by the Winter Simulation Conference? How much unity exists between the scientific areas and communities represented by the newer social science simulation conferences? And how much unity exists between Discrete Event Simulation and the newer forms of social science simulation? These and other questions about the unity and diversity of Computer Simulation have been discussed via email from April 17 to May 17, 2018, by five leading experts: Alexis Drogoul, Paul Fishwick, Nigel Gilbert, Dennis Pegden and Levent Yilmaz, moderated by Gerd Wagner.}, language = {en} }